Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 KRT90P-201ENST00000549264 1064 ntBASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 AC005225.4-201ENST00000557330 545 ntBASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 OR10B1P-201ENST00000601666 907 ntBASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 AC244669.2-201ENST00000612320 853 ntBASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TTC9CQ8N5M4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TTC9CQ8N5M4 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AL035633.1-201ENST00000406139 838 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AL590640.2-201ENST00000457038 527 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AC078819.1-201ENST00000547454 765 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AC012085.1-201ENST00000548270 765 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 RN7SL713P-201ENST00000582127 302 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AC008825.2-201ENST00000603374 718 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AC138951.2-201ENST00000623455 1161 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 AL354989.2-201ENST00000435838 1540 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 HSPA7-201ENST00000445535 1927 ntBASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TTC9CQ8N5M4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AC079781.5-202ENST00000641784 3743 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms