Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TPM3P8-201ENST00000330554 643 ntBASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 HMGN1P19-201ENST00000436976 333 ntBASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AL590640.2-201ENST00000457038 527 ntBASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AP001889.1-201ENST00000525414 633 ntBASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AL031595.1-201ENST00000623969 4709 ntBASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00346Q8IVM7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00346Q8IVM7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 RN7SL48P-201ENST00000579283 293 ntBASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00346Q8IVM7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms