Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 TREML5P-201ENST00000421694 576 ntBASIC15.23■□□□□ 0.03
CCDC25Q86WR0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 TMEM198B-204ENST00000484016 896 ntBASIC15.23■□□□□ 0.03
CCDC25Q86WR0 AC026434.2-201ENST00000506094 1078 ntBASIC15.23■□□□□ 0.03
CCDC25Q86WR0 AC004449.1-201ENST00000564240 433 ntBASIC15.23■□□□□ 0.03
CCDC25Q86WR0 AC140878.1-201ENST00000565277 250 ntBASIC15.23■□□□□ 0.03
CCDC25Q86WR0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AC015688.4-201ENST00000580780 1647 ntBASIC15.22■□□□□ 0.03
CCDC25Q86WR0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AL365181.3-201ENST00000605886 3222 ntBASIC15.22■□□□□ 0.03
CCDC25Q86WR0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 NUS1P3-201ENST00000423502 862 ntBASIC15.22■□□□□ 0.03
CCDC25Q86WR0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 BX539320.1-201ENST00000623759 877 ntBASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AC134684.3-201ENST00000641758 218 ntBASIC15.22■□□□□ 0.03
CCDC25Q86WR0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AC011840.2-201ENST00000563063 1520 ntBASIC15.22■□□□□ 0.03
CCDC25Q86WR0 AC215219.1-201ENST00000400706 1817 ntBASIC15.22■□□□□ 0.03
CCDC25Q86WR0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC25Q86WR0 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC25Q86WR0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms