Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 RNA5SP417-201ENST00000516459 108 ntBASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 AP000322.3-201ENST00000608665 388 ntBASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 AC018529.2-202ENST00000611482 3087 ntBASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 MARK2P16-201ENST00000605714 1723 ntBASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 AC131206.1-201ENST00000538078 1211 ntBASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 FTLP5-201ENST00000586853 534 ntBASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 AL139339.2-201ENST00000608063 657 ntBASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 HMGB1P24-201ENST00000611897 328 ntBASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.8■□□□□ 0.28
OTOP1Q7RTM1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 FGD5P1-202ENST00000614866 2498 ntBASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 AC018629.1-201ENST00000623381 1736 ntBASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 SERBP1P2-201ENST00000436888 1164 ntBASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 PGAM1P12-201ENST00000505622 748 ntBASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 BX088702.1-201ENST00000610784 235 ntBASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.79■□□□□ 0.28
OTOP1Q7RTM1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms