Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 AL359183.1-201ENST00000623796 2132 ntBASIC17.39■□□□□ 0.37
CTR9Q6PD62 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.39■□□□□ 0.37
CTR9Q6PD62 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTR9Q6PD62 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 AGGF1P1-201ENST00000509500 2073 ntBASIC17.38■□□□□ 0.37
CTR9Q6PD62 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 AC007326.2-201ENST00000624224 7579 ntBASIC17.38■□□□□ 0.37
CTR9Q6PD62 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 AC011742.3-201ENST00000439053 820 ntBASIC17.38■□□□□ 0.37
CTR9Q6PD62 IGHJ2P-201ENST00000454480 60 ntBASIC17.38■□□□□ 0.37
CTR9Q6PD62 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTR9Q6PD62 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.38■□□□□ 0.37
CTR9Q6PD62 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 RN7SKP214-201ENST00000364208 315 ntBASIC17.37■□□□□ 0.37
CTR9Q6PD62 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AL008707.1-201ENST00000422498 534 ntBASIC17.37■□□□□ 0.37
CTR9Q6PD62 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC078875.1-201ENST00000431907 724 ntBASIC17.37■□□□□ 0.37
CTR9Q6PD62 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 MYADML-201ENST00000474610 2147 ntBASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.37■□□□□ 0.37
CTR9Q6PD62 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC133540.1-201ENST00000620845 1019 ntBASIC17.37■□□□□ 0.37
CTR9Q6PD62 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC100757.4-201ENST00000626934 759 ntBASIC17.37■□□□□ 0.37
CTR9Q6PD62 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.37■□□□□ 0.37
CTR9Q6PD62 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTR9Q6PD62 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms