Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 KRT18P36-201ENST00000411618 1276 ntBASIC16.79■□□□□ 0.28
USH1GQ495M9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.79■□□□□ 0.28
USH1GQ495M9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.79■□□□□ 0.28
USH1GQ495M9 RN7SL720P-201ENST00000488178 304 ntBASIC16.79■□□□□ 0.28
USH1GQ495M9 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.79■□□□□ 0.28
USH1GQ495M9 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.79■□□□□ 0.28
USH1GQ495M9 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.79■□□□□ 0.28
USH1GQ495M9 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.79■□□□□ 0.28
USH1GQ495M9 AL161670.2-201ENST00000557650 1227 ntBASIC16.79■□□□□ 0.28
USH1GQ495M9 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.79■□□□□ 0.28
USH1GQ495M9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
USH1GQ495M9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
USH1GQ495M9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.78■□□□□ 0.28
USH1GQ495M9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
USH1GQ495M9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.78■□□□□ 0.28
USH1GQ495M9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
USH1GQ495M9 CICP24-201ENST00000605464 2705 ntBASIC16.78■□□□□ 0.28
USH1GQ495M9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.78■□□□□ 0.28
USH1GQ495M9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.78■□□□□ 0.28
USH1GQ495M9 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
USH1GQ495M9 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 AC073150.1-201ENST00000450406 1084 ntBASIC16.78■□□□□ 0.28
USH1GQ495M9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.78■□□□□ 0.28
USH1GQ495M9 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.78■□□□□ 0.28
USH1GQ495M9 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.78■□□□□ 0.28
USH1GQ495M9 AF254983.2-201ENST00000612331 135 ntBASIC16.78■□□□□ 0.28
USH1GQ495M9 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
USH1GQ495M9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.78■□□□□ 0.28
USH1GQ495M9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USH1GQ495M9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
USH1GQ495M9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.78■□□□□ 0.28
USH1GQ495M9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
USH1GQ495M9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
USH1GQ495M9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.77■□□□□ 0.28
USH1GQ495M9 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.77■□□□□ 0.28
USH1GQ495M9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.77■□□□□ 0.28
USH1GQ495M9 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USH1GQ495M9 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.77■□□□□ 0.28
USH1GQ495M9 RNA5SP423-201ENST00000517127 109 ntBASIC16.77■□□□□ 0.28
USH1GQ495M9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.77■□□□□ 0.28
USH1GQ495M9 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
USH1GQ495M9 AC106872.11-201ENST00000605838 421 ntBASIC16.77■□□□□ 0.28
USH1GQ495M9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USH1GQ495M9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USH1GQ495M9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
USH1GQ495M9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USH1GQ495M9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USH1GQ495M9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.77■□□□□ 0.27
USH1GQ495M9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.77■□□□□ 0.27
USH1GQ495M9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
USH1GQ495M9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
USH1GQ495M9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
USH1GQ495M9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USH1GQ495M9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms