Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AL591846.1-201ENST00000451736 433 ntBASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 TUBB8P8-201ENST00000458717 1058 ntBASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AC136759.1-202ENST00000530858 2194 ntBASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AC005962.1-201ENST00000584100 773 ntBASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AC005324.6-201ENST00000587972 613 ntBASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AL033527.4-201ENST00000641026 673 ntBASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PRICKLE4Q2TBC4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 KRT8P29-201ENST00000420409 1371 ntBASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 ST13P19-201ENST00000442505 1124 ntBASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AC021723.1-201ENST00000486306 515 ntBASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AL160314.3-201ENST00000556041 767 ntBASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AC005695.3-201ENST00000614522 232 ntBASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AL023803.2-201ENST00000620080 638 ntBASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AC144522.1-201ENST00000625111 1658 ntBASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.59□□□□□ -0.23
PRICKLE4Q2TBC4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
PRICKLE4Q2TBC4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
PRICKLE4Q2TBC4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PRICKLE4Q2TBC4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PRICKLE4Q2TBC4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PRICKLE4Q2TBC4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PRICKLE4Q2TBC4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms