Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC018442.1-201ENST00000421439 2061 ntBASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 ERP29P1-201ENST00000442902 706 ntBASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC026410.1-201ENST00000507366 1101 ntBASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 HERC2P11-201ENST00000562845 725 ntBASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC100756.2-201ENST00000569537 736 ntBASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC007250.1-201ENST00000608934 338 ntBASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 LINC00554-201ENST00000564841 3011 ntBASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 PAUPAR-201ENST00000630360 2965 ntBASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 LINC00634-202ENST00000505157 222 ntBASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 AC141586.1-203ENST00000567242 366 ntBASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 MIR5196-201ENST00000578146 115 ntBASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 RN7SL665P-201ENST00000578793 300 ntBASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM71Q2Q1W2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms