Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.5□□□□□ -0.41
EFNB3Q15768 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
EFNB3Q15768 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
EFNB3Q15768 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
EFNB3Q15768 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 KHSRPP1-201ENST00000427983 1768 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.49□□□□□ -0.41
EFNB3Q15768 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 TMBIM7P-202ENST00000641474 1516 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB3Q15768 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AL596276.2-201ENST00000447525 331 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB3Q15768 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
EFNB3Q15768 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AC245884.6-201ENST00000515672 1067 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AC090857.1-201ENST00000527400 390 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB3Q15768 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.49□□□□□ -0.41
EFNB3Q15768 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
EFNB3Q15768 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
EFNB3Q15768 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
EFNB3Q15768 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
EFNB3Q15768 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 FGD5P1-202ENST00000614866 2498 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 AJ011931.1-201ENST00000618749 2492 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 AC136759.1-202ENST00000530858 2194 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.49□□□□□ -0.41
EFNB3Q15768 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB3Q15768 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.49□□□□□ -0.41
EFNB3Q15768 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB3Q15768 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB3Q15768 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms