Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP7AQ04656 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC21.02■□□□□ 0.96
ATP7AQ04656 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ATP7AQ04656 URAHP-205ENST00000610227 398 ntBASIC21.02■□□□□ 0.96
ATP7AQ04656 MIR6816-201ENST00000620368 66 ntBASIC21.02■□□□□ 0.96
ATP7AQ04656 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP7AQ04656 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP7AQ04656 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
ATP7AQ04656 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC21.02■□□□□ 0.95
ATP7AQ04656 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP7AQ04656 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP7AQ04656 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
ATP7AQ04656 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ATP7AQ04656 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP7AQ04656 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.02■□□□□ 0.95
ATP7AQ04656 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
ATP7AQ04656 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ATP7AQ04656 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP7AQ04656 AC013268.4-201ENST00000637413 2228 ntBASIC21.01■□□□□ 0.95
ATP7AQ04656 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP7AQ04656 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP7AQ04656 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP7AQ04656 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP7AQ04656 SIRPB3P-201ENST00000340424 1216 ntBASIC21.01■□□□□ 0.95
ATP7AQ04656 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP7AQ04656 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP7AQ04656 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC21.01■□□□□ 0.95
ATP7AQ04656 NALT1-202ENST00000450304 437 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP7AQ04656 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP7AQ04656 MT3-202ENST00000561640 514 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP7AQ04656 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP7AQ04656 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP7AQ04656 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 AL591424.3-201ENST00000614278 872 ntBASIC21.01■□□□□ 0.95
ATP7AQ04656 AC011462.4-201ENST00000616866 449 ntBASIC21.01■□□□□ 0.95
ATP7AQ04656 AC139713.2-207ENST00000641556 1292 ntBASIC21.01■□□□□ 0.95
ATP7AQ04656 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ATP7AQ04656 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP7AQ04656 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP7AQ04656 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP7AQ04656 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP7AQ04656 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP7AQ04656 AC092115.1-201ENST00000566277 1402 ntBASIC21.01■□□□□ 0.95
ATP7AQ04656 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP7AQ04656 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ATP7AQ04656 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC21■□□□□ 0.95
ATP7AQ04656 AC136604.1-202ENST00000425471 771 ntBASIC21■□□□□ 0.95
ATP7AQ04656 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC21■□□□□ 0.95
ATP7AQ04656 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC21■□□□□ 0.95
ATP7AQ04656 CDCA4P4-201ENST00000435216 680 ntBASIC21■□□□□ 0.95
ATP7AQ04656 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ATP7AQ04656 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 COQ10BP2-201ENST00000513804 724 ntBASIC21■□□□□ 0.95
ATP7AQ04656 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC21■□□□□ 0.95
ATP7AQ04656 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC21■□□□□ 0.95
ATP7AQ04656 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC21■□□□□ 0.95
ATP7AQ04656 PRMT1P1-201ENST00000604252 1009 ntBASIC21■□□□□ 0.95
ATP7AQ04656 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC21■□□□□ 0.95
ATP7AQ04656 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ATP7AQ04656 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC21■□□□□ 0.95
ATP7AQ04656 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
ATP7AQ04656 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
ATP7AQ04656 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC21■□□□□ 0.95
ATP7AQ04656 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC21■□□□□ 0.95
ATP7AQ04656 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
ATP7AQ04656 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC21■□□□□ 0.95
ATP7AQ04656 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP7AQ04656 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ATP7AQ04656 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP7AQ04656 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP7AQ04656 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP7AQ04656 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP7AQ04656 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
ATP7AQ04656 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC20.99■□□□□ 0.95
ATP7AQ04656 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC20.99■□□□□ 0.95
ATP7AQ04656 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP7AQ04656 ANKRD26P1-203ENST00000569528 966 ntBASIC20.99■□□□□ 0.95
ATP7AQ04656 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP7AQ04656 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms