Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC112694.1-202ENST00000540985 943 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 AC026120.2-201ENST00000617239 309 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
HSPG2P98160 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 C18orf15-201ENST00000623680 2534 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 MROH4P-201ENST00000431302 1578 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC8.68□□□□□ -1.02
HSPG2P98160 AL161932.2-201ENST00000435436 679 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 RPSAP70-201ENST00000504462 864 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC8.68□□□□□ -1.02
HSPG2P98160 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 PSME3-213ENST00000592169 826 ntTSL 3 BASIC8.68□□□□□ -1.02
HSPG2P98160 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC8.68□□□□□ -1.02
HSPG2P98160 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HSPG2P98160 RBMX2P5-201ENST00000424312 969 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 HNRNPA3P12-201ENST00000437410 1063 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC8.68□□□□□ -1.02
HSPG2P98160 HNRNPA1P73-201ENST00000446472 928 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 RN7SL47P-201ENST00000488710 299 ntBASIC8.68□□□□□ -1.02
HSPG2P98160 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
HSPG2P98160 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC8.68□□□□□ -1.02
HSPG2P98160 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 LILRP2-202ENST00000413572 1383 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 AC010086.2-201ENST00000428616 226 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 SRP9P1-201ENST00000445874 261 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 AC009517.1-201ENST00000454750 570 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 AC100858.1-201ENST00000514059 1228 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 HNRNPA1P7-201ENST00000521273 963 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 ALG10-202ENST00000538927 571 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 AC023051.2-201ENST00000541141 460 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 AL137028.2-201ENST00000614601 256 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
HSPG2P98160 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC8.67□□□□□ -1.02
HSPG2P98160 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC8.67□□□□□ -1.02
HSPG2P98160 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 LINC00115-201ENST00000473798 1317 ntBASIC8.67□□□□□ -1.02
HSPG2P98160 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC8.67□□□□□ -1.02
HSPG2P98160 MGST3-204ENST00000367888 778 ntTSL 3 BASIC8.67□□□□□ -1.02
HSPG2P98160 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HSPG2P98160 AP001331.1-201ENST00000413008 1015 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms