Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 GAPDHP21-201ENST00000450301 1010 ntBASIC11.9□□□□□ -0.5
CX3CL1P78423 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.9□□□□□ -0.5
CX3CL1P78423 GNRHR2-203ENST00000581100 1187 ntBASIC11.9□□□□□ -0.5
CX3CL1P78423 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.9□□□□□ -0.5
CX3CL1P78423 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.9□□□□□ -0.51
CX3CL1P78423 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CX3CL1P78423 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
CX3CL1P78423 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
CX3CL1P78423 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
CX3CL1P78423 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CX3CL1P78423 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CX3CL1P78423 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.9□□□□□ -0.51
CX3CL1P78423 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
CX3CL1P78423 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.89□□□□□ -0.51
CX3CL1P78423 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CX3CL1P78423 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CX3CL1P78423 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.89□□□□□ -0.51
CX3CL1P78423 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CX3CL1P78423 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 POM121L8P-201ENST00000417732 1281 ntBASIC11.89□□□□□ -0.51
CX3CL1P78423 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.89□□□□□ -0.51
CX3CL1P78423 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
CX3CL1P78423 POM121L9P-203ENST00000441984 1285 ntBASIC11.89□□□□□ -0.51
CX3CL1P78423 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.89□□□□□ -0.51
CX3CL1P78423 AC007551.1-201ENST00000457394 519 ntBASIC11.89□□□□□ -0.51
CX3CL1P78423 RNA5SP486-201ENST00000515961 83 ntBASIC11.89□□□□□ -0.51
CX3CL1P78423 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CX3CL1P78423 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.89□□□□□ -0.51
CX3CL1P78423 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.89□□□□□ -0.51
CX3CL1P78423 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.89□□□□□ -0.51
CX3CL1P78423 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.89□□□□□ -0.51
CX3CL1P78423 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.89□□□□□ -0.51
CX3CL1P78423 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.89□□□□□ -0.51
CX3CL1P78423 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CX3CL1P78423 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CX3CL1P78423 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CX3CL1P78423 AC003102.2-201ENST00000589195 1469 ntBASIC11.89□□□□□ -0.51
CX3CL1P78423 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CX3CL1P78423 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CX3CL1P78423 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CX3CL1P78423 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms