Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAE1P78406 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAE1P78406 AC023794.5-201ENST00000564380 2157 ntBASIC13.88□□□□□ -0.19
RAE1P78406 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.87□□□□□ -0.19
RAE1P78406 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.87□□□□□ -0.19
RAE1P78406 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
RAE1P78406 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 AC132192.2-201ENST00000596206 1147 ntBASIC13.87□□□□□ -0.19
RAE1P78406 LINC02084-201ENST00000606069 1096 ntBASIC13.87□□□□□ -0.19
RAE1P78406 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAE1P78406 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RAE1P78406 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.87□□□□□ -0.19
RAE1P78406 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RAE1P78406 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 ANKRD19P-201ENST00000338192 862 ntBASIC13.86□□□□□ -0.19
RAE1P78406 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.86□□□□□ -0.19
RAE1P78406 AL645933.1-201ENST00000440087 609 ntBASIC13.86□□□□□ -0.19
RAE1P78406 HOMER2P2-201ENST00000451621 847 ntBASIC13.86□□□□□ -0.19
RAE1P78406 AC100850.1-201ENST00000506768 649 ntBASIC13.86□□□□□ -0.19
RAE1P78406 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.86□□□□□ -0.19
RAE1P78406 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.86□□□□□ -0.19
RAE1P78406 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.86□□□□□ -0.19
RAE1P78406 AC106886.1-201ENST00000568660 600 ntBASIC13.86□□□□□ -0.19
RAE1P78406 AC012645.4-201ENST00000610691 1061 ntBASIC13.86□□□□□ -0.19
RAE1P78406 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAE1P78406 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.86□□□□□ -0.19
RAE1P78406 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAE1P78406 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.86□□□□□ -0.19
RAE1P78406 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms