Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLDN6P56747 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN6P56747 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN6P56747 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 ZBED1P1-201ENST00000502364 1930 ntBASIC14.04□□□□□ -0.16
CLDN6P56747 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN6P56747 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN6P56747 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLDN6P56747 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN6P56747 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN6P56747 GCOM2-201ENST00000509133 1104 ntBASIC14.04□□□□□ -0.16
CLDN6P56747 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN6P56747 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN6P56747 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CLDN6P56747 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLDN6P56747 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.04□□□□□ -0.16
CLDN6P56747 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN6P56747 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CLDN6P56747 AC020658.6-201ENST00000623564 1870 ntBASIC14.04□□□□□ -0.16
CLDN6P56747 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 SSR4P1-203ENST00000599569 2260 ntBASIC14.03□□□□□ -0.16
CLDN6P56747 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN6P56747 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CLDN6P56747 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 XBP1P1-201ENST00000436573 652 ntBASIC14.03□□□□□ -0.16
CLDN6P56747 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN6P56747 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 FTH1P22-201ENST00000456305 520 ntBASIC14.03□□□□□ -0.16
CLDN6P56747 ALG1L13P-202ENST00000519320 584 ntBASIC14.03□□□□□ -0.16
CLDN6P56747 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.03□□□□□ -0.16
CLDN6P56747 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN6P56747 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN6P56747 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN6P56747 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN6P56747 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms