Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.82□□□□□ -0.04
WNT3AP56704 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.82□□□□□ -0.04
WNT3AP56704 IGHV3-71-201ENST00000523324 359 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 DUX4L46-201ENST00000566845 751 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 MIR4741-201ENST00000579822 90 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 MIR6805-201ENST00000615055 62 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
WNT3AP56704 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 AL365209.1-201ENST00000624418 6473 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 AC136759.1-202ENST00000530858 2194 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
WNT3AP56704 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.81□□□□□ -0.04
WNT3AP56704 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.81□□□□□ -0.04
WNT3AP56704 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 AC132192.2-201ENST00000596206 1147 ntBASIC14.81□□□□□ -0.04
WNT3AP56704 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
WNT3AP56704 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.81□□□□□ -0.04
WNT3AP56704 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
WNT3AP56704 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
WNT3AP56704 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.8□□□□□ -0.04
WNT3AP56704 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
WNT3AP56704 AC079178.1-201ENST00000420915 656 ntBASIC14.8□□□□□ -0.04
WNT3AP56704 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.8□□□□□ -0.04
WNT3AP56704 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms