Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KCNQ4P56696 AC026691.1-201ENST00000602502 2017 ntBASIC18.35■□□□□ 0.53
KCNQ4P56696 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KCNQ4P56696 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KCNQ4P56696 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNQ4P56696 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 AC091951.1-201ENST00000512854 2465 ntBASIC18.34■□□□□ 0.53
KCNQ4P56696 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNQ4P56696 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNQ4P56696 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNQ4P56696 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KCNQ4P56696 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNQ4P56696 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNQ4P56696 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNQ4P56696 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KCNQ4P56696 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 AC008026.2-201ENST00000495438 348 ntBASIC18.34■□□□□ 0.53
KCNQ4P56696 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNQ4P56696 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNQ4P56696 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNQ4P56696 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNQ4P56696 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNQ4P56696 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNQ4P56696 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNQ4P56696 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.33■□□□□ 0.53
KCNQ4P56696 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.33■□□□□ 0.53
KCNQ4P56696 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
KCNQ4P56696 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
KCNQ4P56696 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KCNQ4P56696 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNQ4P56696 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNQ4P56696 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNQ4P56696 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC18.33■□□□□ 0.53
KCNQ4P56696 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
KCNQ4P56696 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
KCNQ4P56696 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.33■□□□□ 0.52
KCNQ4P56696 EEF1GP8-201ENST00000506566 1154 ntBASIC18.33■□□□□ 0.52
KCNQ4P56696 IGHEP2-201ENST00000519308 1256 ntBASIC18.33■□□□□ 0.52
KCNQ4P56696 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
KCNQ4P56696 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 AL132994.1-201ENST00000554098 400 ntBASIC18.33■□□□□ 0.52
KCNQ4P56696 COQ4-204ENST00000608951 781 ntTSL 2 BASIC18.33■□□□□ 0.52
KCNQ4P56696 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC18.33■□□□□ 0.52
KCNQ4P56696 AC091769.1-201ENST00000619576 568 ntBASIC18.33■□□□□ 0.52
KCNQ4P56696 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC18.33■□□□□ 0.52
KCNQ4P56696 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.33■□□□□ 0.52
KCNQ4P56696 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KCNQ4P56696 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.33■□□□□ 0.52
KCNQ4P56696 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
KCNQ4P56696 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KCNQ4P56696 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC18.33■□□□□ 0.52
KCNQ4P56696 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KCNQ4P56696 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 AC019109.1-201ENST00000401725 1874 ntBASIC18.33■□□□□ 0.52
KCNQ4P56696 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNQ4P56696 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
KCNQ4P56696 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNQ4P56696 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNQ4P56696 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNQ4P56696 AC008741.2-201ENST00000612792 3115 ntBASIC18.32■□□□□ 0.52
KCNQ4P56696 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNQ4P56696 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNQ4P56696 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNQ4P56696 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.32■□□□□ 0.52
KCNQ4P56696 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNQ4P56696 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNQ4P56696 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms