Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH8P55286 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH8P55286 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH8P55286 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH8P55286 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH8P55286 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDH8P55286 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH8P55286 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH8P55286 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH8P55286 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH8P55286 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH8P55286 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 FAM58BP-201ENST00000439056 645 ntBASIC15.61■□□□□ 0.09
CDH8P55286 AC004898.1-201ENST00000451057 766 ntBASIC15.61■□□□□ 0.09
CDH8P55286 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH8P55286 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.61■□□□□ 0.09
CDH8P55286 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CDH8P55286 RBM8B-201ENST00000555532 525 ntBASIC15.61■□□□□ 0.09
CDH8P55286 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH8P55286 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 AC068587.8-201ENST00000641239 219 ntBASIC15.61■□□□□ 0.09
CDH8P55286 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDH8P55286 LINC01230-201ENST00000625222 3017 ntBASIC15.61■□□□□ 0.09
CDH8P55286 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH8P55286 AC126755.1-201ENST00000525846 6405 ntBASIC15.61■□□□□ 0.09
CDH8P55286 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH8P55286 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH8P55286 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH8P55286 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH8P55286 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.6■□□□□ 0.09
CDH8P55286 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CDH8P55286 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH8P55286 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH8P55286 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 HLA-J-204ENST00000495278 958 ntBASIC15.6■□□□□ 0.09
CDH8P55286 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 AC027237.1-201ENST00000560942 655 ntBASIC15.6■□□□□ 0.09
CDH8P55286 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH8P55286 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH8P55286 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 RN7SL163P-201ENST00000583100 276 ntBASIC15.6■□□□□ 0.09
CDH8P55286 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 AC026748.1-201ENST00000624349 3251 ntBASIC15.6■□□□□ 0.09
CDH8P55286 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH8P55286 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 FAM90A7P-201ENST00000382628 1395 ntBASIC15.6■□□□□ 0.09
CDH8P55286 FAM90A23P-201ENST00000400136 1395 ntBASIC15.6■□□□□ 0.09
CDH8P55286 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH8P55286 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms