Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LIMK1P53667 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.43□□□□□ -0.1
LIMK1P53667 AC006122.1-201ENST00000493323 440 ntBASIC14.43□□□□□ -0.1
LIMK1P53667 MRPL22P1-201ENST00000505398 616 ntBASIC14.43□□□□□ -0.1
LIMK1P53667 AC026410.1-201ENST00000507366 1101 ntBASIC14.43□□□□□ -0.1
LIMK1P53667 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.43□□□□□ -0.1
LIMK1P53667 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.43□□□□□ -0.1
LIMK1P53667 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.43□□□□□ -0.1
LIMK1P53667 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.43□□□□□ -0.1
LIMK1P53667 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.43□□□□□ -0.1
LIMK1P53667 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.43□□□□□ -0.1
LIMK1P53667 AC007326.1-201ENST00000604539 458 ntBASIC14.43□□□□□ -0.1
LIMK1P53667 AC006158.1-201ENST00000610661 249 ntBASIC14.43□□□□□ -0.1
LIMK1P53667 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LIMK1P53667 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.43□□□□□ -0.1
LIMK1P53667 AC002472.4-201ENST00000641915 272 ntBASIC14.43□□□□□ -0.1
LIMK1P53667 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 INE2-201ENST00000630399 1874 ntBASIC14.43□□□□□ -0.1
LIMK1P53667 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.43□□□□□ -0.1
LIMK1P53667 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.43□□□□□ -0.1
LIMK1P53667 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LIMK1P53667 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.43□□□□□ -0.1
LIMK1P53667 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIMK1P53667 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
LIMK1P53667 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 AC015909.3-201ENST00000572855 1794 ntBASIC14.42□□□□□ -0.1
LIMK1P53667 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 LINC01165-201ENST00000445190 1623 ntBASIC14.42□□□□□ -0.1
LIMK1P53667 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LIMK1P53667 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.42□□□□□ -0.1
LIMK1P53667 HLA-DMA-203ENST00000395305 777 ntBASIC14.42□□□□□ -0.1
LIMK1P53667 RPL5P21-201ENST00000404620 815 ntBASIC14.42□□□□□ -0.1
LIMK1P53667 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.42□□□□□ -0.1
LIMK1P53667 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.42□□□□□ -0.1
LIMK1P53667 ALG3P1-201ENST00000508806 1114 ntBASIC14.42□□□□□ -0.1
LIMK1P53667 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.42□□□□□ -0.1
LIMK1P53667 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.42□□□□□ -0.1
LIMK1P53667 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.42□□□□□ -0.1
LIMK1P53667 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.42□□□□□ -0.1
LIMK1P53667 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LIMK1P53667 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.42□□□□□ -0.1
LIMK1P53667 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LIMK1P53667 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.42□□□□□ -0.1
LIMK1P53667 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LIMK1P53667 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.41□□□□□ -0.1
LIMK1P53667 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.41□□□□□ -0.1
LIMK1P53667 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.41□□□□□ -0.1
LIMK1P53667 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LIMK1P53667 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMK1P53667 AL157407.1-201ENST00000435784 904 ntBASIC14.41□□□□□ -0.1
LIMK1P53667 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms