Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AF254983.2-201ENST00000612331 135 ntBASIC13.71□□□□□ -0.21
EFNA3P52797 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA3P52797 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
EFNA3P52797 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA3P52797 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA3P52797 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA3P52797 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA3P52797 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
EFNA3P52797 AC008132.1-202ENST00000342005 1389 ntBASIC13.71□□□□□ -0.22
EFNA3P52797 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
EFNA3P52797 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNA3P52797 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNA3P52797 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNA3P52797 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
EFNA3P52797 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNA3P52797 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNA3P52797 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.7□□□□□ -0.22
EFNA3P52797 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.7□□□□□ -0.22
EFNA3P52797 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
EFNA3P52797 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.7□□□□□ -0.22
EFNA3P52797 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.7□□□□□ -0.22
EFNA3P52797 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 AC009884.2-201ENST00000603110 324 ntBASIC13.7□□□□□ -0.22
EFNA3P52797 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.7□□□□□ -0.22
EFNA3P52797 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.7□□□□□ -0.22
EFNA3P52797 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.7□□□□□ -0.22
EFNA3P52797 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
EFNA3P52797 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNA3P52797 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA3P52797 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EFNA3P52797 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.69□□□□□ -0.22
EFNA3P52797 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
EFNA3P52797 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
EFNA3P52797 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.69□□□□□ -0.22
EFNA3P52797 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
EFNA3P52797 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms