Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 AC234783.1-201ENST00000441761 496 ntBASIC14.3□□□□□ -0.12
CLCN2P51788 AC012441.1-201ENST00000446669 685 ntBASIC14.3□□□□□ -0.12
CLCN2P51788 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 KRT18P25-201ENST00000508931 1278 ntBASIC14.3□□□□□ -0.12
CLCN2P51788 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.3□□□□□ -0.12
CLCN2P51788 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.3□□□□□ -0.12
CLCN2P51788 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.3□□□□□ -0.12
CLCN2P51788 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.3□□□□□ -0.12
CLCN2P51788 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 AP005019.2-201ENST00000615104 511 ntBASIC14.3□□□□□ -0.12
CLCN2P51788 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.3□□□□□ -0.12
CLCN2P51788 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.3□□□□□ -0.12
CLCN2P51788 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLCN2P51788 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.3□□□□□ -0.12
CLCN2P51788 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 AC068760.1-201ENST00000493579 1953 ntBASIC14.3□□□□□ -0.12
CLCN2P51788 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLCN2P51788 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLCN2P51788 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CLCN2P51788 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.3□□□□□ -0.12
CLCN2P51788 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLCN2P51788 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
CLCN2P51788 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
CLCN2P51788 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLCN2P51788 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.29□□□□□ -0.12
CLCN2P51788 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CLCN2P51788 AC005229.1-201ENST00000392885 409 ntBASIC14.29□□□□□ -0.12
CLCN2P51788 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.29□□□□□ -0.12
CLCN2P51788 AC112492.5-201ENST00000421897 457 ntBASIC14.29□□□□□ -0.12
CLCN2P51788 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.29□□□□□ -0.12
CLCN2P51788 AC022137.2-201ENST00000503482 481 ntBASIC14.29□□□□□ -0.12
CLCN2P51788 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.29□□□□□ -0.12
CLCN2P51788 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.29□□□□□ -0.12
CLCN2P51788 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.29□□□□□ -0.12
CLCN2P51788 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLCN2P51788 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLCN2P51788 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 AC018665.1-201ENST00000622927 1362 ntBASIC14.29□□□□□ -0.12
CLCN2P51788 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.29□□□□□ -0.12
CLCN2P51788 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLCN2P51788 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLCN2P51788 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CLCN2P51788 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLCN2P51788 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLCN2P51788 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms