Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNA4P43681 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 BNIP3P42-201ENST00000454982 569 ntBASIC14.79□□□□□ -0.04
CHRNA4P43681 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 HSPA8P5-201ENST00000456928 2069 ntBASIC14.79□□□□□ -0.04
CHRNA4P43681 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 AP005482.1-201ENST00000563722 1273 ntBASIC14.79□□□□□ -0.04
CHRNA4P43681 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 BNIP3P29-201ENST00000598302 571 ntBASIC14.79□□□□□ -0.04
CHRNA4P43681 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 AC011447.5-201ENST00000616168 564 ntBASIC14.79□□□□□ -0.04
CHRNA4P43681 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNA4P43681 AC009542.2-202ENST00000619004 1067 ntBASIC14.79□□□□□ -0.04
CHRNA4P43681 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNA4P43681 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNA4P43681 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNA4P43681 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHRNA4P43681 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 AC016397.2-201ENST00000624848 1985 ntBASIC14.78□□□□□ -0.04
CHRNA4P43681 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHRNA4P43681 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHRNA4P43681 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 OR8S1-201ENST00000310194 1080 ntBASIC14.78□□□□□ -0.04
CHRNA4P43681 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA4P43681 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA4P43681 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.78□□□□□ -0.04
CHRNA4P43681 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.78□□□□□ -0.04
CHRNA4P43681 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNA4P43681 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA4P43681 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA4P43681 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 MIR6074-201ENST00000612054 107 ntBASIC14.78□□□□□ -0.04
CHRNA4P43681 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 MIR6805-201ENST00000615055 62 ntBASIC14.78□□□□□ -0.04
CHRNA4P43681 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNA4P43681 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 AC041040.2-201ENST00000622926 2899 ntBASIC14.78□□□□□ -0.04
CHRNA4P43681 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA4P43681 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA4P43681 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNA4P43681 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms