Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC21.28■■□□□ 1
KDM5CP41229 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC21.28■■□□□ 1
KDM5CP41229 ANKRD26P1-203ENST00000569528 966 ntBASIC21.28■■□□□ 1
KDM5CP41229 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC21.28■■□□□ 1
KDM5CP41229 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC21.28■■□□□ 1
KDM5CP41229 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC21.28■■□□□ 1
KDM5CP41229 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC21.28■■□□□ 1
KDM5CP41229 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC21.28■■□□□ 1
KDM5CP41229 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC21.28■■□□□ 1
KDM5CP41229 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KDM5CP41229 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC21.28■■□□□ 1
KDM5CP41229 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
KDM5CP41229 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KDM5CP41229 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
KDM5CP41229 MX1-218ENST00000619682 1980 ntTSL 5 BASIC21.28■■□□□ 1
KDM5CP41229 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM5CP41229 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
KDM5CP41229 AP000354.1-201ENST00000396982 456 ntBASIC21.27■■□□□ 1
KDM5CP41229 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC21.27■■□□□ 1
KDM5CP41229 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC21.27■■□□□ 1
KDM5CP41229 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC21.27■■□□□ 1
KDM5CP41229 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC21.27■■□□□ 1
KDM5CP41229 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC21.27■■□□□ 1
KDM5CP41229 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC21.27■■□□□ 1
KDM5CP41229 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC21.27■■□□□ 1
KDM5CP41229 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC21.27■■□□□ 1
KDM5CP41229 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC21.27■■□□□ 1
KDM5CP41229 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
KDM5CP41229 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC21.27■■□□□ 1
KDM5CP41229 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
KDM5CP41229 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC21.27■■□□□ 1
KDM5CP41229 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
KDM5CP41229 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
KDM5CP41229 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
KDM5CP41229 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.27■■□□□ 1
KDM5CP41229 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.27■■□□□ 1
KDM5CP41229 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC21.27■■□□□ 1
KDM5CP41229 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM5CP41229 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
KDM5CP41229 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC21.27■□□□□ 0.99
KDM5CP41229 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC21.27■□□□□ 0.99
KDM5CP41229 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC21.27■□□□□ 0.99
KDM5CP41229 RNLS-203ENST00000437752 525 ntTSL 2 BASIC21.27■□□□□ 0.99
KDM5CP41229 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC21.27■□□□□ 0.99
KDM5CP41229 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC21.27■□□□□ 0.99
KDM5CP41229 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC21.27■□□□□ 0.99
KDM5CP41229 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC21.27■□□□□ 0.99
KDM5CP41229 AC073869.4-201ENST00000620841 800 ntBASIC21.27■□□□□ 0.99
KDM5CP41229 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
KDM5CP41229 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC21.27■□□□□ 0.99
KDM5CP41229 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC21.27■□□□□ 0.99
KDM5CP41229 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KDM5CP41229 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM5CP41229 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM5CP41229 SARS-202ENST00000369923 1882 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM5CP41229 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM5CP41229 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM5CP41229 EEF1DP5-201ENST00000431410 772 ntBASIC21.26■□□□□ 0.99
KDM5CP41229 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM5CP41229 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC21.26■□□□□ 0.99
KDM5CP41229 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KDM5CP41229 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC21.26■□□□□ 0.99
KDM5CP41229 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC21.26■□□□□ 0.99
KDM5CP41229 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM5CP41229 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms