Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC5P40937 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 SLC25A24P2-201ENST00000415059 510 ntBASIC16.15■□□□□ 0.18
RFC5P40937 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.15■□□□□ 0.18
RFC5P40937 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC5P40937 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
RFC5P40937 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RFC5P40937 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.15■□□□□ 0.18
RFC5P40937 MIR3619-201ENST00000579667 83 ntBASIC16.15■□□□□ 0.18
RFC5P40937 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.15■□□□□ 0.18
RFC5P40937 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.15■□□□□ 0.18
RFC5P40937 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.15■□□□□ 0.18
RFC5P40937 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFC5P40937 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.15■□□□□ 0.18
RFC5P40937 AC018629.1-201ENST00000623381 1736 ntBASIC16.15■□□□□ 0.18
RFC5P40937 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC5P40937 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.15■□□□□ 0.18
RFC5P40937 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC5P40937 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFC5P40937 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC5P40937 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
RFC5P40937 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
RFC5P40937 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RFC5P40937 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.14■□□□□ 0.17
RFC5P40937 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFC5P40937 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RFC5P40937 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RFC5P40937 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.14■□□□□ 0.17
RFC5P40937 ST13P19-201ENST00000442505 1124 ntBASIC16.14■□□□□ 0.17
RFC5P40937 IGHJ2P-201ENST00000454480 60 ntBASIC16.14■□□□□ 0.17
RFC5P40937 RN7SL11P-201ENST00000471305 293 ntBASIC16.14■□□□□ 0.17
RFC5P40937 HNRNPA1P23-201ENST00000491091 1133 ntBASIC16.14■□□□□ 0.17
RFC5P40937 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.14■□□□□ 0.17
RFC5P40937 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.14■□□□□ 0.17
RFC5P40937 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.14■□□□□ 0.17
RFC5P40937 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.14■□□□□ 0.17
RFC5P40937 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.14■□□□□ 0.17
RFC5P40937 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 AL157813.1-201ENST00000612996 587 ntBASIC16.14■□□□□ 0.17
RFC5P40937 AC138627.1-207ENST00000641560 1006 ntBASIC16.14■□□□□ 0.17
RFC5P40937 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.14■□□□□ 0.17
RFC5P40937 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.14■□□□□ 0.17
RFC5P40937 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFC5P40937 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.14■□□□□ 0.17
RFC5P40937 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.14■□□□□ 0.17
RFC5P40937 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RFC5P40937 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFC5P40937 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFC5P40937 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFC5P40937 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFC5P40937 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.13■□□□□ 0.17
RFC5P40937 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFC5P40937 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RFC5P40937 AC215219.1-201ENST00000400706 1817 ntBASIC16.13■□□□□ 0.17
RFC5P40937 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RFC5P40937 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RFC5P40937 AL662890.1-201ENST00000396818 632 ntBASIC16.13■□□□□ 0.17
RFC5P40937 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFC5P40937 ACTG1P2-201ENST00000415776 1125 ntBASIC16.13■□□□□ 0.17
RFC5P40937 ACTG1P11-201ENST00000425411 1125 ntBASIC16.13■□□□□ 0.17
RFC5P40937 Z97180.1-201ENST00000445173 988 ntBASIC16.13■□□□□ 0.17
RFC5P40937 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.13■□□□□ 0.17
RFC5P40937 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.13■□□□□ 0.17
RFC5P40937 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.13■□□□□ 0.17
RFC5P40937 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RFC5P40937 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.13■□□□□ 0.17
RFC5P40937 AC005586.2-201ENST00000563946 837 ntBASIC16.13■□□□□ 0.17
RFC5P40937 AC124068.2-201ENST00000569473 1109 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms