Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COL15A1P39059 AC068867.1-201ENST00000559855 150 ntBASIC18.29■□□□□ 0.52
COL15A1P39059 RN7SL357P-201ENST00000581065 298 ntBASIC18.29■□□□□ 0.52
COL15A1P39059 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.29■□□□□ 0.52
COL15A1P39059 AC006158.1-201ENST00000610661 249 ntBASIC18.29■□□□□ 0.52
COL15A1P39059 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL15A1P39059 TEKT4P2-202ENST00000559466 1312 ntBASIC18.28■□□□□ 0.52
COL15A1P39059 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
COL15A1P39059 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL15A1P39059 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.28■□□□□ 0.52
COL15A1P39059 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.28■□□□□ 0.52
COL15A1P39059 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COL15A1P39059 AGGF1P1-201ENST00000509500 2073 ntBASIC18.28■□□□□ 0.52
COL15A1P39059 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL15A1P39059 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.28■□□□□ 0.52
COL15A1P39059 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.28■□□□□ 0.52
COL15A1P39059 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.28■□□□□ 0.52
COL15A1P39059 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.28■□□□□ 0.52
COL15A1P39059 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.28■□□□□ 0.52
COL15A1P39059 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.28■□□□□ 0.52
COL15A1P39059 MYADML-201ENST00000474610 2147 ntBASIC18.28■□□□□ 0.52
COL15A1P39059 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.28■□□□□ 0.52
COL15A1P39059 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL15A1P39059 MIR4472-1-201ENST00000584349 80 ntBASIC18.28■□□□□ 0.52
COL15A1P39059 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.28■□□□□ 0.52
COL15A1P39059 MIR6074-201ENST00000612054 107 ntBASIC18.28■□□□□ 0.52
COL15A1P39059 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.28■□□□□ 0.52
COL15A1P39059 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL15A1P39059 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.28■□□□□ 0.52
COL15A1P39059 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL15A1P39059 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL15A1P39059 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL15A1P39059 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
COL15A1P39059 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
COL15A1P39059 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL15A1P39059 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.27■□□□□ 0.52
COL15A1P39059 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL15A1P39059 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL15A1P39059 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL15A1P39059 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.27■□□□□ 0.51
COL15A1P39059 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.27■□□□□ 0.51
COL15A1P39059 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.27■□□□□ 0.51
COL15A1P39059 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.27■□□□□ 0.51
COL15A1P39059 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.27■□□□□ 0.51
COL15A1P39059 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL15A1P39059 AC002044.2-201ENST00000624910 970 ntBASIC18.27■□□□□ 0.51
COL15A1P39059 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.27■□□□□ 0.51
COL15A1P39059 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL15A1P39059 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
COL15A1P39059 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
COL15A1P39059 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.27■□□□□ 0.51
COL15A1P39059 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.27■□□□□ 0.51
COL15A1P39059 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL15A1P39059 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL15A1P39059 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL15A1P39059 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL15A1P39059 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.26■□□□□ 0.51
COL15A1P39059 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COL15A1P39059 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms