Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT9P35527 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT9P35527 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.1■□□□□ 0.17
KRT9P35527 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT9P35527 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 AC093433.1-201ENST00000458048 571 ntBASIC16.1■□□□□ 0.17
KRT9P35527 GIMAP3P-201ENST00000495150 836 ntBASIC16.1■□□□□ 0.17
KRT9P35527 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.1■□□□□ 0.17
KRT9P35527 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT9P35527 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT9P35527 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KRT9P35527 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT9P35527 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT9P35527 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KRT9P35527 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 AC023794.5-201ENST00000564380 2157 ntBASIC16.09■□□□□ 0.17
KRT9P35527 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
KRT9P35527 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 AP006294.1-201ENST00000415407 339 ntBASIC16.09■□□□□ 0.17
KRT9P35527 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT9P35527 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT9P35527 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KRT9P35527 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KRT9P35527 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT9P35527 AC131206.1-201ENST00000538078 1211 ntBASIC16.09■□□□□ 0.17
KRT9P35527 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.09■□□□□ 0.17
KRT9P35527 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT9P35527 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT9P35527 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT9P35527 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT9P35527 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
KRT9P35527 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 KRT8P35-201ENST00000483942 1338 ntBASIC16.09■□□□□ 0.17
KRT9P35527 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KRT9P35527 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
KRT9P35527 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT9P35527 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT9P35527 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT9P35527 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KRT9P35527 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
KRT9P35527 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT9P35527 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT9P35527 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.08■□□□□ 0.17
KRT9P35527 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
KRT9P35527 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms