Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 AC131212.3-201ENST00000624087 4219 ntBASIC15.56■□□□□ 0.08
CTNNA1P35221 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.56■□□□□ 0.08
CTNNA1P35221 MYCLP2-201ENST00000449268 967 ntBASIC15.56■□□□□ 0.08
CTNNA1P35221 FO681548.1-201ENST00000455617 1132 ntBASIC15.56■□□□□ 0.08
CTNNA1P35221 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.56■□□□□ 0.08
CTNNA1P35221 GCOM2-201ENST00000509133 1104 ntBASIC15.56■□□□□ 0.08
CTNNA1P35221 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 ENPP7P5-201ENST00000541031 1031 ntBASIC15.56■□□□□ 0.08
CTNNA1P35221 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 CLUHP6-201ENST00000580789 941 ntBASIC15.56■□□□□ 0.08
CTNNA1P35221 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.56■□□□□ 0.08
CTNNA1P35221 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
CTNNA1P35221 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.56■□□□□ 0.08
CTNNA1P35221 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.56■□□□□ 0.08
CTNNA1P35221 CICP16-201ENST00000502609 2813 ntBASIC15.56■□□□□ 0.08
CTNNA1P35221 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CTNNA1P35221 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTNNA1P35221 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CTNNA1P35221 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.55■□□□□ 0.08
CTNNA1P35221 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.55■□□□□ 0.08
CTNNA1P35221 C8orf49-201ENST00000525043 1968 ntBASIC15.55■□□□□ 0.08
CTNNA1P35221 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 AC015688.4-201ENST00000580780 1647 ntBASIC15.55■□□□□ 0.08
CTNNA1P35221 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CTNNA1P35221 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CTNNA1P35221 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 KRT8P35-201ENST00000483942 1338 ntBASIC15.55■□□□□ 0.08
CTNNA1P35221 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CTNNA1P35221 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.55■□□□□ 0.08
CTNNA1P35221 SERBP1P5-201ENST00000510079 1181 ntBASIC15.55■□□□□ 0.08
CTNNA1P35221 RNA5SP421-201ENST00000516864 134 ntBASIC15.55■□□□□ 0.08
CTNNA1P35221 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.55■□□□□ 0.08
CTNNA1P35221 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.55■□□□□ 0.08
CTNNA1P35221 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CTNNA1P35221 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.55■□□□□ 0.08
CTNNA1P35221 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTNNA1P35221 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms