Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
PTPN6P29350 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PTPN6P29350 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.94□□□□□ -0.18
PTPN6P29350 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 CLUHP2-201ENST00000426660 1303 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PTPN6P29350 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
PTPN6P29350 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTPN6P29350 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTPN6P29350 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTPN6P29350 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 AC234783.1-201ENST00000441761 496 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 CROCCP4-201ENST00000457096 498 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.94□□□□□ -0.18
PTPN6P29350 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.94□□□□□ -0.18
PTPN6P29350 MESTP3-201ENST00000503460 968 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 AC106760.1-201ENST00000508690 800 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 IGHV3-71-201ENST00000523324 359 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.94□□□□□ -0.18
PTPN6P29350 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.94□□□□□ -0.18
PTPN6P29350 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.94□□□□□ -0.18
PTPN6P29350 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.94□□□□□ -0.18
PTPN6P29350 BX088702.1-201ENST00000610784 235 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.94□□□□□ -0.18
PTPN6P29350 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 AC020910.5-201ENST00000623668 1865 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.94□□□□□ -0.18
PTPN6P29350 AL137784.3-201ENST00000623858 2288 ntBASIC13.94□□□□□ -0.18
PTPN6P29350 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.94□□□□□ -0.18
PTPN6P29350 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PTPN6P29350 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.94□□□□□ -0.18
PTPN6P29350 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
PTPN6P29350 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTPN6P29350 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PTPN6P29350 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PTPN6P29350 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
PTPN6P29350 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.93□□□□□ -0.18
PTPN6P29350 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PTPN6P29350 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 AC092933.1-201ENST00000393644 945 ntBASIC13.93□□□□□ -0.18
PTPN6P29350 BOLA2P3-201ENST00000404566 256 ntBASIC13.93□□□□□ -0.18
PTPN6P29350 POM121L8P-201ENST00000417732 1281 ntBASIC13.93□□□□□ -0.18
PTPN6P29350 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.93□□□□□ -0.18
PTPN6P29350 POM121L9P-203ENST00000441984 1285 ntBASIC13.93□□□□□ -0.18
PTPN6P29350 ATP5G2P4-201ENST00000442175 420 ntBASIC13.93□□□□□ -0.18
PTPN6P29350 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.93□□□□□ -0.18
PTPN6P29350 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.93□□□□□ -0.18
PTPN6P29350 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.93□□□□□ -0.18
PTPN6P29350 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.93□□□□□ -0.18
PTPN6P29350 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.93□□□□□ -0.18
PTPN6P29350 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.93□□□□□ -0.18
PTPN6P29350 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.93□□□□□ -0.18
PTPN6P29350 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.93□□□□□ -0.18
PTPN6P29350 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
PTPN6P29350 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PTPN6P29350 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTPN6P29350 CICP17-201ENST00000418553 2377 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms