Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
XPAP23025 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
XPAP23025 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
XPAP23025 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
XPAP23025 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.83□□□□□ -0.03
XPAP23025 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
XPAP23025 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.83□□□□□ -0.04
XPAP23025 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.83□□□□□ -0.04
XPAP23025 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.83□□□□□ -0.04
XPAP23025 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
XPAP23025 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 AC012441.2-201ENST00000444843 739 ntBASIC14.83□□□□□ -0.04
XPAP23025 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.83□□□□□ -0.04
XPAP23025 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.83□□□□□ -0.04
XPAP23025 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.83□□□□□ -0.04
XPAP23025 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.83□□□□□ -0.04
XPAP23025 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
XPAP23025 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.83□□□□□ -0.04
XPAP23025 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
XPAP23025 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 AC020914.3-201ENST00000594712 304 ntBASIC14.83□□□□□ -0.04
XPAP23025 AC009955.4-201ENST00000597192 544 ntBASIC14.83□□□□□ -0.04
XPAP23025 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.83□□□□□ -0.04
XPAP23025 AL162426.1-201ENST00000624141 743 ntBASIC14.83□□□□□ -0.04
XPAP23025 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.83□□□□□ -0.04
XPAP23025 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.83□□□□□ -0.04
XPAP23025 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.83□□□□□ -0.04
XPAP23025 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
XPAP23025 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
XPAP23025 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
XPAP23025 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
XPAP23025 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
XPAP23025 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
XPAP23025 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.82□□□□□ -0.04
XPAP23025 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
XPAP23025 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 FGD5P1-202ENST00000614866 2498 ntBASIC14.82□□□□□ -0.04
XPAP23025 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 GPAA1P2-201ENST00000417923 928 ntBASIC14.82□□□□□ -0.04
XPAP23025 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.82□□□□□ -0.04
XPAP23025 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 EIF4HP1-201ENST00000453115 687 ntBASIC14.82□□□□□ -0.04
XPAP23025 SERPINA13P-202ENST00000478994 924 ntBASIC14.82□□□□□ -0.04
XPAP23025 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.82□□□□□ -0.04
XPAP23025 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.82□□□□□ -0.04
XPAP23025 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 AC103810.3-201ENST00000583567 96 ntBASIC14.82□□□□□ -0.04
XPAP23025 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.82□□□□□ -0.04
XPAP23025 MIR6787-201ENST00000616675 61 ntBASIC14.82□□□□□ -0.04
XPAP23025 AL136295.7-201ENST00000619226 1200 ntBASIC14.82□□□□□ -0.04
XPAP23025 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
XPAP23025 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
XPAP23025 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
XPAP23025 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.82□□□□□ -0.04
XPAP23025 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.82□□□□□ -0.04
XPAP23025 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.82□□□□□ -0.04
XPAP23025 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
XPAP23025 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
XPAP23025 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
XPAP23025 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.82□□□□□ -0.04
XPAP23025 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms