Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNA3P22001 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNA3P22001 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.59■□□□□ 0.41
KCNA3P22001 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 IFNWP2-201ENST00000431203 580 ntBASIC17.59■□□□□ 0.41
KCNA3P22001 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.59■□□□□ 0.41
KCNA3P22001 CDCA4P4-201ENST00000435216 680 ntBASIC17.59■□□□□ 0.41
KCNA3P22001 AC092903.1-201ENST00000466506 262 ntBASIC17.59■□□□□ 0.41
KCNA3P22001 AC025594.1-201ENST00000469533 543 ntBASIC17.59■□□□□ 0.41
KCNA3P22001 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC17.59■□□□□ 0.41
KCNA3P22001 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.59■□□□□ 0.41
KCNA3P22001 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.59■□□□□ 0.41
KCNA3P22001 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNA3P22001 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNA3P22001 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KCNA3P22001 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNA3P22001 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNA3P22001 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNA3P22001 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA3P22001 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA3P22001 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
KCNA3P22001 AC015688.4-201ENST00000580780 1647 ntBASIC17.58■□□□□ 0.41
KCNA3P22001 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA3P22001 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA3P22001 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA3P22001 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA3P22001 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA3P22001 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNA3P22001 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
KCNA3P22001 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
KCNA3P22001 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNA3P22001 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
KCNA3P22001 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.58■□□□□ 0.4
KCNA3P22001 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNA3P22001 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
KCNA3P22001 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNA3P22001 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.58■□□□□ 0.4
KCNA3P22001 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
KCNA3P22001 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNA3P22001 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNA3P22001 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.58■□□□□ 0.4
KCNA3P22001 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.58■□□□□ 0.4
KCNA3P22001 RN7SL556P-201ENST00000582856 298 ntBASIC17.58■□□□□ 0.4
KCNA3P22001 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.58■□□□□ 0.4
KCNA3P22001 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNA3P22001 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 AC139713.2-207ENST00000641556 1292 ntBASIC17.58■□□□□ 0.4
KCNA3P22001 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
KCNA3P22001 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNA3P22001 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.58■□□□□ 0.4
KCNA3P22001 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNA3P22001 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KCNA3P22001 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.57■□□□□ 0.4
KCNA3P22001 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.57■□□□□ 0.4
KCNA3P22001 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNA3P22001 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.57■□□□□ 0.4
KCNA3P22001 FAM21EP-201ENST00000417804 985 ntBASIC17.57■□□□□ 0.4
KCNA3P22001 AP000244.1-201ENST00000424582 201 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms