Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.24□□□□□ -0.61
NTF3P20783 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.24□□□□□ -0.61
NTF3P20783 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.24□□□□□ -0.61
NTF3P20783 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.24□□□□□ -0.61
NTF3P20783 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.24□□□□□ -0.61
NTF3P20783 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
NTF3P20783 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
NTF3P20783 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.24□□□□□ -0.61
NTF3P20783 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
NTF3P20783 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.24□□□□□ -0.61
NTF3P20783 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
NTF3P20783 AC064836.3-201ENST00000607928 673 ntBASIC11.24□□□□□ -0.61
NTF3P20783 Z83851.2-201ENST00000609564 659 ntBASIC11.24□□□□□ -0.61
NTF3P20783 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.24□□□□□ -0.61
NTF3P20783 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
NTF3P20783 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
NTF3P20783 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.24□□□□□ -0.61
NTF3P20783 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.24□□□□□ -0.61
NTF3P20783 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NTF3P20783 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 MIR346-201ENST00000362234 95 ntBASIC11.23□□□□□ -0.61
NTF3P20783 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
NTF3P20783 FO393414.2-201ENST00000405153 598 ntBASIC11.23□□□□□ -0.61
NTF3P20783 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.23□□□□□ -0.61
NTF3P20783 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.23□□□□□ -0.61
NTF3P20783 FAM86C2P-203ENST00000528684 1004 ntBASIC11.23□□□□□ -0.61
NTF3P20783 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
NTF3P20783 AP000842.3-202ENST00000569238 1080 ntBASIC11.23□□□□□ -0.61
NTF3P20783 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.23□□□□□ -0.61
NTF3P20783 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.23□□□□□ -0.61
NTF3P20783 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 AL645728.2-202ENST00000641679 227 ntBASIC11.23□□□□□ -0.61
NTF3P20783 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
NTF3P20783 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
NTF3P20783 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NTF3P20783 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
NTF3P20783 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.22□□□□□ -0.61
NTF3P20783 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
NTF3P20783 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms