Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2B1P20020 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2B1P20020 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2B1P20020 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATP2B1P20020 MIR1202-201ENST00000408529 83 ntBASIC16.98■□□□□ 0.31
ATP2B1P20020 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.98■□□□□ 0.31
ATP2B1P20020 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2B1P20020 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 KRT43P-201ENST00000434019 910 ntBASIC16.98■□□□□ 0.31
ATP2B1P20020 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ATP2B1P20020 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP2B1P20020 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP2B1P20020 AC131206.1-201ENST00000538078 1211 ntBASIC16.98■□□□□ 0.31
ATP2B1P20020 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP2B1P20020 KRT90P-201ENST00000549264 1064 ntBASIC16.98■□□□□ 0.31
ATP2B1P20020 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 AL162274.1-201ENST00000617191 1098 ntBASIC16.98■□□□□ 0.31
ATP2B1P20020 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.98■□□□□ 0.31
ATP2B1P20020 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2B1P20020 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP2B1P20020 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2B1P20020 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2B1P20020 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP2B1P20020 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP2B1P20020 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 PTENP1-202ENST00000532280 3996 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 AC006504.5-208ENST00000588784 2401 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ATP2B1P20020 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.97■□□□□ 0.31
ATP2B1P20020 AC112492.5-201ENST00000421897 457 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 AP003171.2-201ENST00000528208 925 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 KRT17P8-201ENST00000540749 863 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 AC106820.3-201ENST00000561653 397 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 MIR4683-201ENST00000579659 81 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP2B1P20020 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 AL359183.1-201ENST00000623796 2132 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2B1P20020 AC012617.1-204ENST00000586340 2305 ntBASIC16.97■□□□□ 0.31
ATP2B1P20020 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2B1P20020 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2B1P20020 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP2B1P20020 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP2B1P20020 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ATP2B1P20020 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ATP2B1P20020 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATP2B1P20020 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
ATP2B1P20020 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP2B1P20020 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ATP2B1P20020 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATP2B1P20020 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATP2B1P20020 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATP2B1P20020 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2B1P20020 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms