Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.03■□□□□ -0
HMGA1P17096 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.03■□□□□ -0
HMGA1P17096 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.03■□□□□ -0
HMGA1P17096 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.03■□□□□ -0
HMGA1P17096 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.03■□□□□ -0
HMGA1P17096 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.03■□□□□ -0
HMGA1P17096 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
HMGA1P17096 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 COX6A1P2-201ENST00000620597 330 ntBASIC15.03■□□□□ -0
HMGA1P17096 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 AC011491.1-203ENST00000637688 543 ntBASIC15.03■□□□□ -0
HMGA1P17096 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HMGA1P17096 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.03■□□□□ -0
HMGA1P17096 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HMGA1P17096 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.03■□□□□ -0
HMGA1P17096 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HMGA1P17096 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA1P17096 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.02■□□□□ -0
HMGA1P17096 CICP24-201ENST00000605464 2705 ntBASIC15.02■□□□□ -0
HMGA1P17096 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.02■□□□□ -0
HMGA1P17096 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HMGA1P17096 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
HMGA1P17096 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.02■□□□□ -0
HMGA1P17096 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.02■□□□□ -0
HMGA1P17096 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.02■□□□□ -0
HMGA1P17096 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.02■□□□□ -0
HMGA1P17096 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.02■□□□□ -0
HMGA1P17096 RPSAP31-201ENST00000416648 895 ntBASIC15.02■□□□□ -0
HMGA1P17096 AC073869.2-201ENST00000417338 1026 ntBASIC15.02■□□□□ -0
HMGA1P17096 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.02■□□□□ -0
HMGA1P17096 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.02■□□□□ -0
HMGA1P17096 CHCHD2P9-201ENST00000461726 456 ntBASIC15.02■□□□□ -0
HMGA1P17096 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.02■□□□□ -0
HMGA1P17096 MRPL22P1-201ENST00000505398 616 ntBASIC15.02■□□□□ -0
HMGA1P17096 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.02■□□□□ -0
HMGA1P17096 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.02■□□□□ -0
HMGA1P17096 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.02■□□□□ -0
HMGA1P17096 RPL17P45-201ENST00000586289 509 ntBASIC15.02■□□□□ -0
HMGA1P17096 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HMGA1P17096 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.02■□□□□ -0
HMGA1P17096 U62317.3-201ENST00000608319 855 ntBASIC15.02■□□□□ -0
HMGA1P17096 AC007881.3-201ENST00000608897 607 ntBASIC15.02■□□□□ -0
HMGA1P17096 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA1P17096 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA1P17096 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA1P17096 CCT8L1P-201ENST00000465400 1674 ntBASIC15.02□□□□□ -0.01
HMGA1P17096 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA1P17096 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA1P17096 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
HMGA1P17096 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA1P17096 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA1P17096 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA1P17096 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA1P17096 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.02□□□□□ -0.01
HMGA1P17096 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HMGA1P17096 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 LINC01815-202ENST00000641468 1409 ntBASIC15.01□□□□□ -0.01
HMGA1P17096 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGA1P17096 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA1P17096 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGA1P17096 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms