Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 AC006001.1-201ENST00000325130 474 ntBASIC14.36□□□□□ -0.11
CDH1P12830 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 MIR1202-201ENST00000408529 83 ntBASIC14.36□□□□□ -0.11
CDH1P12830 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH1P12830 CD8B2-202ENST00000417670 633 ntBASIC14.36□□□□□ -0.11
CDH1P12830 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.36□□□□□ -0.11
CDH1P12830 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH1P12830 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH1P12830 AP003171.2-201ENST00000528208 925 ntBASIC14.36□□□□□ -0.11
CDH1P12830 AC131206.1-201ENST00000538078 1211 ntBASIC14.36□□□□□ -0.11
CDH1P12830 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 AP000812.2-201ENST00000538934 718 ntBASIC14.36□□□□□ -0.11
CDH1P12830 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 RHOXF1P1-202ENST00000635473 501 ntBASIC14.36□□□□□ -0.11
CDH1P12830 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CDH1P12830 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CDH1P12830 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH1P12830 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDH1P12830 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 AC007326.2-201ENST00000624224 7579 ntBASIC14.35□□□□□ -0.11
CDH1P12830 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 ANKRD19P-201ENST00000338192 862 ntBASIC14.35□□□□□ -0.11
CDH1P12830 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CDH1P12830 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH1P12830 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH1P12830 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 RN7SKP175-201ENST00000408472 289 ntBASIC14.35□□□□□ -0.11
CDH1P12830 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.35□□□□□ -0.11
CDH1P12830 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 GPR53P-205ENST00000457298 1084 ntBASIC14.35□□□□□ -0.11
CDH1P12830 ACA64.2-201ENST00000459014 129 ntBASIC14.35□□□□□ -0.11
CDH1P12830 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH1P12830 GCOM2-201ENST00000509133 1104 ntBASIC14.35□□□□□ -0.11
CDH1P12830 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.35□□□□□ -0.11
CDH1P12830 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH1P12830 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDH1P12830 HILS1-202ENST00000545329 423 ntBASIC14.35□□□□□ -0.11
CDH1P12830 SNX29P1-201ENST00000548357 1007 ntBASIC14.35□□□□□ -0.11
CDH1P12830 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH1P12830 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDH1P12830 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH1P12830 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH1P12830 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms