Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBL4AP11441 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.67□□□□□ -0.22
UBL4AP11441 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.67□□□□□ -0.22
UBL4AP11441 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
UBL4AP11441 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 AC016694.1-201ENST00000434179 700 ntBASIC13.67□□□□□ -0.22
UBL4AP11441 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 TPT1P11-201ENST00000458482 498 ntBASIC13.67□□□□□ -0.22
UBL4AP11441 FTH1P14-201ENST00000482930 551 ntBASIC13.67□□□□□ -0.22
UBL4AP11441 RNA5SP486-201ENST00000515961 83 ntBASIC13.67□□□□□ -0.22
UBL4AP11441 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.67□□□□□ -0.22
UBL4AP11441 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.67□□□□□ -0.22
UBL4AP11441 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.67□□□□□ -0.22
UBL4AP11441 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.67□□□□□ -0.22
UBL4AP11441 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.67□□□□□ -0.22
UBL4AP11441 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBL4AP11441 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.67□□□□□ -0.22
UBL4AP11441 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
UBL4AP11441 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBL4AP11441 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UBL4AP11441 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 FKBP4P6-201ENST00000457486 1332 ntBASIC13.66□□□□□ -0.22
UBL4AP11441 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UBL4AP11441 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UBL4AP11441 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 RN7SKP230-201ENST00000365642 335 ntBASIC13.66□□□□□ -0.22
UBL4AP11441 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
UBL4AP11441 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 AL590640.2-201ENST00000457038 527 ntBASIC13.66□□□□□ -0.22
UBL4AP11441 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
UBL4AP11441 AC131206.1-201ENST00000538078 1211 ntBASIC13.66□□□□□ -0.22
UBL4AP11441 CR383656.12-201ENST00000549567 513 ntBASIC13.66□□□□□ -0.22
UBL4AP11441 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.66□□□□□ -0.22
UBL4AP11441 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.66□□□□□ -0.22
UBL4AP11441 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UBL4AP11441 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms