Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TOP1P11387 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.24■□□□□ 0.35
TOP1P11387 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 RPL18P13-201ENST00000478088 569 ntBASIC17.24■□□□□ 0.35
TOP1P11387 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.24■□□□□ 0.35
TOP1P11387 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.24■□□□□ 0.35
TOP1P11387 AC103988.2-201ENST00000561804 725 ntBASIC17.24■□□□□ 0.35
TOP1P11387 RN7SL163P-201ENST00000583100 276 ntBASIC17.24■□□□□ 0.35
TOP1P11387 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.24■□□□□ 0.35
TOP1P11387 AC020914.3-201ENST00000594712 304 ntBASIC17.24■□□□□ 0.35
TOP1P11387 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.24■□□□□ 0.35
TOP1P11387 Z98259.2-201ENST00000641583 609 ntBASIC17.24■□□□□ 0.35
TOP1P11387 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TOP1P11387 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.24■□□□□ 0.35
TOP1P11387 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TOP1P11387 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 AC138028.6-201ENST00000616106 1482 ntBASIC17.24■□□□□ 0.35
TOP1P11387 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP1P11387 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TOP1P11387 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP1P11387 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP1P11387 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.23■□□□□ 0.35
TOP1P11387 AL157407.1-201ENST00000435784 904 ntBASIC17.23■□□□□ 0.35
TOP1P11387 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.23■□□□□ 0.35
TOP1P11387 AC104073.2-201ENST00000453737 312 ntBASIC17.23■□□□□ 0.35
TOP1P11387 BX284668.4-201ENST00000453917 508 ntBASIC17.23■□□□□ 0.35
TOP1P11387 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.23■□□□□ 0.35
TOP1P11387 AKR7A2P1-201ENST00000460134 915 ntBASIC17.23■□□□□ 0.35
TOP1P11387 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP1P11387 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP1P11387 AC005740.2-201ENST00000511085 419 ntBASIC17.23■□□□□ 0.35
TOP1P11387 SCARNA20.5-201ENST00000516991 142 ntBASIC17.23■□□□□ 0.35
TOP1P11387 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TOP1P11387 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.23■□□□□ 0.35
TOP1P11387 AC009884.2-201ENST00000603110 324 ntBASIC17.23■□□□□ 0.35
TOP1P11387 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP1P11387 AC068587.8-201ENST00000641239 219 ntBASIC17.23■□□□□ 0.35
TOP1P11387 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TOP1P11387 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP1P11387 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TOP1P11387 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP1P11387 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP1P11387 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP1P11387 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TOP1P11387 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.22■□□□□ 0.35
TOP1P11387 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TOP1P11387 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 AL645933.1-201ENST00000440087 609 ntBASIC17.22■□□□□ 0.35
TOP1P11387 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP1P11387 AC106794.1-201ENST00000506935 792 ntBASIC17.22■□□□□ 0.35
TOP1P11387 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.22■□□□□ 0.35
TOP1P11387 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
TOP1P11387 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.22■□□□□ 0.35
TOP1P11387 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TOP1P11387 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.22■□□□□ 0.35
TOP1P11387 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TOP1P11387 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP1P11387 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TOP1P11387 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms