Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.42■□□□□ 0.06
RARAP10276 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.42■□□□□ 0.06
RARAP10276 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.42■□□□□ 0.06
RARAP10276 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.42■□□□□ 0.06
RARAP10276 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.42■□□□□ 0.06
RARAP10276 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.42■□□□□ 0.06
RARAP10276 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RARAP10276 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.41■□□□□ 0.06
RARAP10276 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
RARAP10276 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
RARAP10276 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RARAP10276 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 AC016694.1-201ENST00000434179 700 ntBASIC15.41■□□□□ 0.06
RARAP10276 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.41■□□□□ 0.06
RARAP10276 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.41■□□□□ 0.06
RARAP10276 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 MIR6074-201ENST00000612054 107 ntBASIC15.41■□□□□ 0.06
RARAP10276 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.41■□□□□ 0.06
RARAP10276 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RARAP10276 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RARAP10276 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 AL365209.1-201ENST00000624418 6473 ntBASIC15.41■□□□□ 0.06
RARAP10276 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.41■□□□□ 0.06
RARAP10276 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RARAP10276 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RARAP10276 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.4■□□□□ 0.06
RARAP10276 HSPA8P5-201ENST00000456928 2069 ntBASIC15.4■□□□□ 0.06
RARAP10276 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.4■□□□□ 0.06
RARAP10276 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RARAP10276 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RARAP10276 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.4■□□□□ 0.06
RARAP10276 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.4■□□□□ 0.06
RARAP10276 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 CNN2P8-201ENST00000421872 913 ntBASIC15.4■□□□□ 0.06
RARAP10276 AC007551.1-201ENST00000457394 519 ntBASIC15.4■□□□□ 0.06
RARAP10276 ALG3P1-201ENST00000508806 1114 ntBASIC15.4■□□□□ 0.06
RARAP10276 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 AC078819.1-201ENST00000547454 765 ntBASIC15.4■□□□□ 0.06
RARAP10276 AC012085.1-201ENST00000548270 765 ntBASIC15.4■□□□□ 0.06
RARAP10276 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.4■□□□□ 0.06
RARAP10276 OR10B1P-201ENST00000601666 907 ntBASIC15.4■□□□□ 0.06
RARAP10276 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.4■□□□□ 0.06
RARAP10276 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.4■□□□□ 0.06
RARAP10276 AC105233.6-201ENST00000642093 218 ntBASIC15.4■□□□□ 0.06
RARAP10276 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RARAP10276 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RARAP10276 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.4■□□□□ 0.06
RARAP10276 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms