Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
MMP2P08253 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.69□□□□□ -0.06
MMP2P08253 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
MMP2P08253 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MMP2P08253 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
MMP2P08253 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP2P08253 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.68□□□□□ -0.06
MMP2P08253 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
MMP2P08253 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP2P08253 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.68□□□□□ -0.06
MMP2P08253 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.68□□□□□ -0.06
MMP2P08253 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.68□□□□□ -0.06
MMP2P08253 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP2P08253 FAM8A2P-201ENST00000528813 1142 ntBASIC14.68□□□□□ -0.06
MMP2P08253 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP2P08253 AC007663.3-201ENST00000609632 465 ntBASIC14.68□□□□□ -0.06
MMP2P08253 AP000346.4-201ENST00000614827 381 ntBASIC14.68□□□□□ -0.06
MMP2P08253 AL023803.2-201ENST00000620080 638 ntBASIC14.68□□□□□ -0.06
MMP2P08253 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP2P08253 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
MMP2P08253 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.68□□□□□ -0.06
MMP2P08253 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MMP2P08253 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
MMP2P08253 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP2P08253 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
MMP2P08253 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP2P08253 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
MMP2P08253 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
MMP2P08253 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP2P08253 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP2P08253 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MMP2P08253 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP2P08253 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.67□□□□□ -0.06
MMP2P08253 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.67□□□□□ -0.06
MMP2P08253 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.67□□□□□ -0.06
MMP2P08253 AC108725.1-201ENST00000495472 409 ntBASIC14.67□□□□□ -0.06
MMP2P08253 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP2P08253 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP2P08253 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.67□□□□□ -0.06
MMP2P08253 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
MMP2P08253 AC133540.1-201ENST00000620845 1019 ntBASIC14.67□□□□□ -0.06
MMP2P08253 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.67□□□□□ -0.06
MMP2P08253 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MMP2P08253 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms