Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 AL158212.4-201ENST00000624062 1286 ntBASIC13.92□□□□□ -0.18
MT-ND1P03886 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.92□□□□□ -0.18
MT-ND1P03886 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MT-ND1P03886 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MT-ND1P03886 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 AL118506.1-201ENST00000601296 3082 ntBASIC13.92□□□□□ -0.18
MT-ND1P03886 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 AC068760.1-201ENST00000493579 1953 ntBASIC13.91□□□□□ -0.18
MT-ND1P03886 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
MT-ND1P03886 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.91□□□□□ -0.18
MT-ND1P03886 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.91□□□□□ -0.18
MT-ND1P03886 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.91□□□□□ -0.18
MT-ND1P03886 AL353779.1-201ENST00000434793 351 ntBASIC13.91□□□□□ -0.18
MT-ND1P03886 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
MT-ND1P03886 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 AC072061.1-201ENST00000569710 2234 ntBASIC13.91□□□□□ -0.18
MT-ND1P03886 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.91□□□□□ -0.18
MT-ND1P03886 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
MT-ND1P03886 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MT-ND1P03886 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
MT-ND1P03886 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.9□□□□□ -0.18
MT-ND1P03886 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.9□□□□□ -0.18
MT-ND1P03886 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MT-ND1P03886 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.9□□□□□ -0.18
MT-ND1P03886 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
MT-ND1P03886 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.9□□□□□ -0.18
MT-ND1P03886 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms