Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CNOT4O95628 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CNOT4O95628 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CNOT4O95628 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 AC007292.2-201ENST00000593524 1812 ntBASIC13.12□□□□□ -0.31
CNOT4O95628 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CNOT4O95628 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CNOT4O95628 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 POM121L10P-201ENST00000436994 1285 ntBASIC13.12□□□□□ -0.31
CNOT4O95628 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 HSPB1P2-201ENST00000448722 546 ntBASIC13.12□□□□□ -0.31
CNOT4O95628 AL035414.1-201ENST00000451327 857 ntBASIC13.12□□□□□ -0.31
CNOT4O95628 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 RPSAP36-202ENST00000494591 1261 ntBASIC13.12□□□□□ -0.31
CNOT4O95628 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CNOT4O95628 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 AC106872.11-201ENST00000605838 421 ntBASIC13.12□□□□□ -0.31
CNOT4O95628 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.12□□□□□ -0.31
CNOT4O95628 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CNOT4O95628 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CNOT4O95628 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.12□□□□□ -0.31
CNOT4O95628 LINC01101-201ENST00000622953 1884 ntBASIC13.12□□□□□ -0.31
CNOT4O95628 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CNOT4O95628 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 AL359183.1-201ENST00000623796 2132 ntBASIC13.12□□□□□ -0.31
CNOT4O95628 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CNOT4O95628 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CNOT4O95628 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.11□□□□□ -0.31
CNOT4O95628 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.11□□□□□ -0.31
CNOT4O95628 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.11□□□□□ -0.31
CNOT4O95628 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CNOT4O95628 MIR663B-201ENST00000408361 115 ntBASIC13.11□□□□□ -0.31
CNOT4O95628 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.11□□□□□ -0.31
CNOT4O95628 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CNOT4O95628 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.11□□□□□ -0.31
CNOT4O95628 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.11□□□□□ -0.31
CNOT4O95628 HIST2H2BB-201ENST00000449108 381 ntBASIC13.11□□□□□ -0.31
CNOT4O95628 RNA5SP423-201ENST00000517127 109 ntBASIC13.11□□□□□ -0.31
CNOT4O95628 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.11□□□□□ -0.31
CNOT4O95628 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.11□□□□□ -0.31
CNOT4O95628 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.11□□□□□ -0.31
CNOT4O95628 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.11□□□□□ -0.31
CNOT4O95628 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms