Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 AC069335.1-201ENST00000489972 472 ntBASIC10.73□□□□□ -0.69
TNFRSF6BO95407 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 AC145285.3-201ENST00000564603 959 ntBASIC10.73□□□□□ -0.69
TNFRSF6BO95407 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 AC003101.2-201ENST00000612557 442 ntBASIC10.73□□□□□ -0.69
TNFRSF6BO95407 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 LINC00628-201ENST00000628516 1289 ntBASIC10.73□□□□□ -0.69
TNFRSF6BO95407 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC10.73□□□□□ -0.69
TNFRSF6BO95407 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 Z95114.2-201ENST00000623490 2205 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 HLA-K-203ENST00000430151 1046 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 MTND6P24-201ENST00000440466 518 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AL592309.1-201ENST00000443127 649 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AC026150.2-201ENST00000564693 1156 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AC025048.3-201ENST00000590609 569 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AC092364.2-202ENST00000597012 1073 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AL445228.2-201ENST00000605589 952 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AC005702.4-201ENST00000618393 416 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 LINC01583-202ENST00000558082 2568 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 AL035456.1-201ENST00000456064 1369 ntBASIC10.72□□□□□ -0.69
TNFRSF6BO95407 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TNFRSF6BO95407 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms