Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 AC093525.8-201ENST00000624099 1342 ntBASIC11.53□□□□□ -0.56
ZNF253O75346 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ZNF253O75346 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
ZNF253O75346 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
ZNF253O75346 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ZNF253O75346 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
ZNF253O75346 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
ZNF253O75346 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.52□□□□□ -0.56
ZNF253O75346 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
ZNF253O75346 AC092053.3-201ENST00000641308 4975 ntBASIC11.52□□□□□ -0.56
ZNF253O75346 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.52□□□□□ -0.56
ZNF253O75346 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ZNF253O75346 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.52□□□□□ -0.57
ZNF253O75346 AC015818.8-201ENST00000587907 1519 ntBASIC11.52□□□□□ -0.57
ZNF253O75346 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.52□□□□□ -0.57
ZNF253O75346 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
ZNF253O75346 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.52□□□□□ -0.57
ZNF253O75346 RPSAP43-201ENST00000402237 625 ntBASIC11.52□□□□□ -0.57
ZNF253O75346 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.52□□□□□ -0.57
ZNF253O75346 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.52□□□□□ -0.57
ZNF253O75346 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 NUS1P3-201ENST00000423502 862 ntBASIC11.52□□□□□ -0.57
ZNF253O75346 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.52□□□□□ -0.57
ZNF253O75346 AP006288.1-201ENST00000446065 395 ntBASIC11.52□□□□□ -0.57
ZNF253O75346 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.52□□□□□ -0.57
ZNF253O75346 HLA-J-203ENST00000494367 1087 ntBASIC11.52□□□□□ -0.57
ZNF253O75346 AC022447.6-201ENST00000515522 438 ntBASIC11.52□□□□□ -0.57
ZNF253O75346 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.52□□□□□ -0.57
ZNF253O75346 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.52□□□□□ -0.57
ZNF253O75346 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.52□□□□□ -0.57
ZNF253O75346 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.52□□□□□ -0.57
ZNF253O75346 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.52□□□□□ -0.57
ZNF253O75346 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.52□□□□□ -0.57
ZNF253O75346 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.52□□□□□ -0.57
ZNF253O75346 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
ZNF253O75346 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
ZNF253O75346 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
ZNF253O75346 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
ZNF253O75346 AC015911.4-201ENST00000588022 1070 ntBASIC11.52□□□□□ -0.57
ZNF253O75346 AL671883.3-201ENST00000603274 991 ntBASIC11.52□□□□□ -0.57
ZNF253O75346 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.52□□□□□ -0.57
ZNF253O75346 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
ZNF253O75346 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.52□□□□□ -0.57
ZNF253O75346 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
ZNF253O75346 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.52□□□□□ -0.57
ZNF253O75346 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms