Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.82□□□□□ -0.2
HCN1O60741 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.82□□□□□ -0.2
HCN1O60741 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCN1O60741 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 KRT8P14-201ENST00000414254 1442 ntBASIC13.81□□□□□ -0.2
HCN1O60741 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 AC092135.3-201ENST00000624151 1846 ntBASIC13.81□□□□□ -0.2
HCN1O60741 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HCN1O60741 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.81□□□□□ -0.2
HCN1O60741 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 AC026954.1-201ENST00000429771 1293 ntBASIC13.81□□□□□ -0.2
HCN1O60741 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.81□□□□□ -0.2
HCN1O60741 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.81□□□□□ -0.2
HCN1O60741 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.81□□□□□ -0.2
HCN1O60741 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.81□□□□□ -0.2
HCN1O60741 AC010328.2-201ENST00000597698 1111 ntBASIC13.81□□□□□ -0.2
HCN1O60741 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.81□□□□□ -0.2
HCN1O60741 AC138951.2-201ENST00000623455 1161 ntBASIC13.81□□□□□ -0.2
HCN1O60741 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 AL122018.1-201ENST00000446607 2310 ntBASIC13.81□□□□□ -0.2
HCN1O60741 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.81□□□□□ -0.2
HCN1O60741 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.81□□□□□ -0.2
HCN1O60741 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCN1O60741 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 REXO1L6P-201ENST00000603433 1515 ntBASIC13.8□□□□□ -0.2
HCN1O60741 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 AL158070.2-201ENST00000623713 1621 ntBASIC13.8□□□□□ -0.2
HCN1O60741 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.8□□□□□ -0.2
HCN1O60741 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
HCN1O60741 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.8□□□□□ -0.2
HCN1O60741 FAM197Y7-201ENST00000432892 766 ntBASIC13.8□□□□□ -0.2
HCN1O60741 ACTBP11-201ENST00000436287 1126 ntBASIC13.8□□□□□ -0.2
HCN1O60741 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.8□□□□□ -0.2
HCN1O60741 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCN1O60741 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms