Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 RARRES2P5-201ENST00000564013 466 ntBASIC15.28■□□□□ 0.04
SRRM3A6NNA2 CU634019.7-201ENST00000624153 1185 ntBASIC15.28■□□□□ 0.04
SRRM3A6NNA2 FP236241.2-201ENST00000624906 1185 ntBASIC15.28■□□□□ 0.04
SRRM3A6NNA2 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 AC126335.2-201ENST00000623362 4637 ntBASIC15.28■□□□□ 0.04
SRRM3A6NNA2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM3A6NNA2 CYP4F24P-201ENST00000586049 1580 ntBASIC15.28■□□□□ 0.04
SRRM3A6NNA2 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.27■□□□□ 0.04
SRRM3A6NNA2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.27■□□□□ 0.04
SRRM3A6NNA2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AC104306.2-201ENST00000451877 341 ntBASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AKR7A2P1-201ENST00000460134 915 ntBASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AC079316.1-201ENST00000548397 411 ntBASIC15.27■□□□□ 0.04
SRRM3A6NNA2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM3A6NNA2 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.27■□□□□ 0.03
SRRM3A6NNA2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 AC005562.1-201ENST00000583030 3219 ntBASIC15.26■□□□□ 0.03
SRRM3A6NNA2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM3A6NNA2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms