Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AL139400.1-201ENST00000366220 510 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AL022342.1-201ENST00000400363 863 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 NUS1P3-201ENST00000423502 862 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AC007969.1-201ENST00000433675 447 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AC027369.6-201ENST00000525520 931 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 ZNF890P-202ENST00000530367 1156 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AC092865.5-201ENST00000545435 363 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AL049840.4-201ENST00000602422 811 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AC072061.1-201ENST00000569710 2234 ntBASIC12.59□□□□□ -0.39
TMEM235A6NFC5 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM235A6NFC5 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM235A6NFC5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
TMEM235A6NFC5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM235A6NFC5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM235A6NFC5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
TMEM235A6NFC5 PCDHA5-203ENST00000614258 4248 ntBASIC12.58□□□□□ -0.39
TMEM235A6NFC5 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM235A6NFC5 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM235A6NFC5 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 AC068760.1-201ENST00000493579 1953 ntBASIC12.58□□□□□ -0.4
TMEM235A6NFC5 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.58□□□□□ -0.4
TMEM235A6NFC5 AL139094.1-201ENST00000405549 1188 ntBASIC12.58□□□□□ -0.4
TMEM235A6NFC5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 AC114501.2-201ENST00000439631 535 ntBASIC12.58□□□□□ -0.4
TMEM235A6NFC5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 AC125807.1-201ENST00000483097 614 ntBASIC12.58□□□□□ -0.4
TMEM235A6NFC5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM235A6NFC5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms