Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 AC093433.1-201ENST00000458048 571 ntBASIC15.62■□□□□ 0.09
RCCD1A6NED2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 TMEM261P1-201ENST00000604899 340 ntBASIC15.62■□□□□ 0.09
RCCD1A6NED2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.62■□□□□ 0.09
RCCD1A6NED2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RCCD1A6NED2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 AL591122.2-201ENST00000624125 1853 ntBASIC15.61■□□□□ 0.09
RCCD1A6NED2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 AC022137.2-201ENST00000503482 481 ntBASIC15.61■□□□□ 0.09
RCCD1A6NED2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 AC133539.2-201ENST00000604757 467 ntBASIC15.61■□□□□ 0.09
RCCD1A6NED2 AC106028.4-201ENST00000614509 607 ntBASIC15.61■□□□□ 0.09
RCCD1A6NED2 AC138466.3-201ENST00000619983 221 ntBASIC15.61■□□□□ 0.09
RCCD1A6NED2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 AL928654.5-201ENST00000624831 2501 ntBASIC15.61■□□□□ 0.09
RCCD1A6NED2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RCCD1A6NED2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RCCD1A6NED2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms