Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC21.27■□□□□ 0.99
HFM1A2PYH4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HFM1A2PYH4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC21.27■□□□□ 0.99
HFM1A2PYH4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
HFM1A2PYH4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC21.27■□□□□ 0.99
HFM1A2PYH4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 HLA-DQB1-202ENST00000399079 1501 ntBASIC21.26■□□□□ 0.99
HFM1A2PYH4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 RPL17P11-201ENST00000417593 544 ntBASIC21.26■□□□□ 0.99
HFM1A2PYH4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC21.26■□□□□ 0.99
HFM1A2PYH4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HFM1A2PYH4 OR6D1P-203ENST00000641209 4860 ntBASIC21.26■□□□□ 0.99
HFM1A2PYH4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 TCAM1P-207ENST00000485295 1537 ntBASIC21.25■□□□□ 0.99
HFM1A2PYH4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 BX679664.3-201ENST00000414070 555 ntBASIC21.25■□□□□ 0.99
HFM1A2PYH4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 AC113935.1-201ENST00000471722 555 ntBASIC21.25■□□□□ 0.99
HFM1A2PYH4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 AC007881.3-201ENST00000608897 607 ntBASIC21.25■□□□□ 0.99
HFM1A2PYH4 AC084781.1-201ENST00000613737 656 ntBASIC21.25■□□□□ 0.99
HFM1A2PYH4 BAP1-211ENST00000615113 489 ntBASIC21.25■□□□□ 0.99
HFM1A2PYH4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HFM1A2PYH4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC21.25■□□□□ 0.99
HFM1A2PYH4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC21.24■□□□□ 0.99
HFM1A2PYH4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 AC098934.1-203ENST00000442868 1262 ntBASIC21.24■□□□□ 0.99
HFM1A2PYH4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 AC005740.1-201ENST00000515639 522 ntBASIC21.24■□□□□ 0.99
HFM1A2PYH4 AC242376.2-201ENST00000619355 883 ntBASIC21.24■□□□□ 0.99
HFM1A2PYH4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms