Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AL662890.1-201ENST00000396818 632 ntBASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AC009955.4-201ENST00000597192 544 ntBASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AC128714.1-201ENST00000637035 887 ntBASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 KRT8P28-201ENST00000433288 1390 ntBASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AC005912.2-201ENST00000619492 2400 ntBASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AL354877.1-201ENST00000424412 413 ntBASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 HSPB1P2-201ENST00000448722 546 ntBASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 MIR4783-201ENST00000580343 82 ntBASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AC132192.2-201ENST00000596206 1147 ntBASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AL008638.5-201ENST00000623814 1298 ntBASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAI2Q9Y5P3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 AC139749.1-202ENST00000617529 3139 ntBASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms