Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 FAM8A4P-201ENST00000435433 1213 ntBASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 IMP3P2-201ENST00000489760 475 ntBASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 AL391280.1-201ENST00000506969 1062 ntBASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 MIR3619-201ENST00000579667 83 ntBASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 MIR6727-201ENST00000620702 65 ntBASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 AC097359.2-201ENST00000604992 2389 ntBASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 AC026748.1-201ENST00000624349 3251 ntBASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 AC020910.5-201ENST00000623668 1865 ntBASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 CYP46A4P-201ENST00000414953 267 ntBASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 AC097724.1-201ENST00000609581 426 ntBASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 MYADML-201ENST00000474610 2147 ntBASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 KRT8P19-201ENST00000551916 1455 ntBASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHB1Q9Y5F3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms