Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 UPF3AP3-201ENST00000420996 769 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AC107890.1-201ENST00000422478 521 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AL589987.1-201ENST00000453380 819 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 RARRES2P5-201ENST00000564013 466 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 SRD5A3P1-201ENST00000603021 949 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AL158211.3-201ENST00000607385 239 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AL662799.1-202ENST00000614205 422 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AC007431.3-201ENST00000623221 587 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 COL6A4P2-202ENST00000504443 2753 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AL157996.1-201ENST00000624684 2299 ntBASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AC092580.3-201ENST00000430932 139 ntBASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AP006288.1-201ENST00000446065 395 ntBASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AC114812.1-204ENST00000449669 728 ntBASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 GIMAP3P-201ENST00000495150 836 ntBASIC10.26□□□□□ -0.77
UBE2D4Q9Y2X8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms