Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 PMS2P2-201ENST00000425039 1128 ntBASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 GCOM2-201ENST00000509133 1104 ntBASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.88□□□□□ -0.19
THUMPD1Q9NXG2 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AC215219.1-201ENST00000400706 1817 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 RN7SL832P-201ENST00000607781 1756 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AC245100.3-201ENST00000441281 285 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 FO681548.1-201ENST00000455617 1132 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 CYMP-203ENST00000474680 1263 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 ALG3P1-201ENST00000508806 1114 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 CU634019.7-201ENST00000624153 1185 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 FP236241.2-201ENST00000624906 1185 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 AC020910.6-201ENST00000623084 1459 ntBASIC13.87□□□□□ -0.19
THUMPD1Q9NXG2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 CICP8-201ENST00000455800 2813 ntBASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 AC015688.4-201ENST00000580780 1647 ntBASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THUMPD1Q9NXG2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms